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#!/bin/bash -f
#CreateIndex ()
#{
# COUNTER=0
# LASTUPDATE=`date`
#
# for Plot in `ls *.png`; do
# if [[ $COUNTER%2 -eq 0 ]]; then
# cat >> index_new.html << EOF
#<TR> <TD align=center> <a href="$Plot"><img src="$Plot"hspace=5 vspace=5 border=0 style="width: 90%" ALT="$Plot"></a>
# <br> $Plot </TD>
#EOF
# else
# cat >> index_new.html << EOF
# <TD align=center> <a href="$Plot"><img src="$Plot"hspace=5 vspace=5 border=0 style="width: 90%" ALT="$Plot"></a>
# <br> $Plot </TD> </TR>
#EOF
# fi
#
# let COUNTER++
# done
#
# cat /afs/cern.ch/cms/tracker/sistrvalidation/WWW/template_index_foot.html | sed -e "s@insertDate@$LASTUPDATE@g" >> index_new.html
#
# mv -f index_new.html index.html
#}
CreateIndex ()
{
LASTUPDATE=`date`
cat >> index_new.html << EOF
<TR> <TD align=center> <a href="SiStripHitEffTKMapBad.png"><img src="SiStripHitEffTKMapBad.png"hspace=5 vspace=5 border=0 style="width: 90%" ALT="SiStripHitEffTKMapBad.png"></a>
<br> SiStripHitEffTKMapBad.png </TD>
EOF
cat >> index_new.html << EOF
<TD align=center> <a href="SiStripHitEffTKMap.png"><img src="SiStripHitEffTKMap.png"hspace=5 vspace=5 border=0 style="width: 90%" ALT="SiStripHitEffTKMap.png"></a>
<br> SiStripHitEffTKMap.png </TD> </TR>
EOF
cat >> index_new.html << EOF
<TR><TD align=center> <a href="Summary.png"><img src="Summary.png"hspace=5 vspace=5 border=0 style="width: 90%" ALT="Summary.png"></a>
<br> Summary.png </TD> </TR>
EOF
cat /afs/cern.ch/cms/tracker/sistrvalidation/WWW/template_index_foot.html | sed -e "s@insertDate@$LASTUPDATE@g" >> index_new.html
mv -f index_new.html index.html
}
if [ $# != 1 ]; then
echo "Usage: $0 CalibTreeFullPath"
echo "Runs the Hit Efficiency Study"
exit 0;
fi
fullpath=$1
echo "The full file path is $fullpath"
#Create a macro file to execute to extract the run number
rm -f run_extract.C
echo '{' >> run_extract.C
#echo 'TFile* f = TFile::Open("'rfio:$1'");' >> run_extract.C
echo 'TFile* f = TFile::Open("'rfio:$1'");' >> run_extract.C
echo 'f->cd("anEff");' >> run_extract.C
echo 'CalibTree = (TTree*)(gDirectory->Get("traj"));' >> run_extract.C
echo 'TLeaf* runLf = CalibTree->GetLeaf("run");' >> run_extract.C
echo 'CalibTree->GetEvent(1);' >> run_extract.C
echo 'double runno = (double)runLf->GetValue();' >> run_extract.C
echo 'cout << runno << endl;' >> run_extract.C
echo '}'>> run_extract.C
root -b -l << EOF >& runnumber1.txt
.x run_extract.C
.q
EOF
runnumber=`cat runnumber1.txt`
echo "The run number is $runnumber"
rm -f runnumber1.txt
cp dbfile_31X_IdealConditions.db dbfile.db
#cp dbfile_31X_IdealConditions.db fakedb.db
cp SiStripHitEff_template.py "SiStripHitEff_run$runnumber.py"
sed -i "s/newrun/$runnumber/g" "SiStripHitEff_run$runnumber.py"
sed -i "s|newfilelocation|$fullpath|g" "SiStripHitEff_run$runnumber.py"
#cp Summary_template.py "Summary_run$runnumber.py"
#sed -i "s/newrun/$runnumber/g" "Summary_run$runnumber.py"
#sed -i "s|newfilelocation|$fullpath|g" "Summary_run$runnumber.py"
cmsRun "SiStripHitEff_run$runnumber.py" >& "run_$runnumber.log"
#cmsRun "Summary_run$runnumber.py" >& "runSummary_$runnumber.log"
cat run_$runnumber.log | awk 'BEGIN{doprint=0}{if(match($0,"New IOV")!=0) doprint=1;if(match($0,"%MSG")!=0) {doprint=0;} if(match($0,"Message")!=0) {doprint=0;} if(doprint==1) print $0}' > InefficientModules_$runnumber.txt
cat run_$runnumber.log | awk 'BEGIN{doprint=0}{if(match($0,"occupancy")!=0) doprint=1;if(match($0,"efficiency")!=0) doprint=1; if(match($0,"%MSG")!=0) {doprint=0;} if(match($0,"tempfilename")!=0) {doprint=0;} if(match($0,"New IOV")!=0) {doprint=0;} if(match($0,"generation")!=0) {doprint=0;} if(doprint==1) print $0}' > EfficiencyResults_$runnumber.txt
#rm run_$runnumber.log
rm -f run_extract.C
#Now publish all of the relevant files
#Create the relevant directories on a per run basis
mkdir "/afs/cern.ch/cms/CAF/CMSALCA/ALCA_TRACKERCALIB/SiStrip/CalibrationValidation/HitEfficiency/run_$runnumber"
mkdir "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber"
mkdir "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/cfg"
mkdir "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/Plots"
mkdir "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/sqlite"
mkdir "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/QualityLog"
#Move the config file
mv "SiStripHitEff_run$runnumber.py" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/cfg"
#mv "plotHitEffSummary_run$runnumber.C" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/cfg"
#Move the log files
mv "InefficientModules_$runnumber.txt" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/QualityLog"
mv "EfficiencyResults_$runnumber.txt" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/QualityLog"
#Move the root file containing hot cold maps
mv "SiStripHitEffHistos_run$runnumber.root" "/afs/cern.ch/cms/CAF/CMSALCA/ALCA_TRACKERCALIB/SiStrip/CalibrationValidation/HitEfficiency/run_$runnumber"
#Generate an index.html file to hold the TKMaps
cat /afs/cern.ch/cms/tracker/sistrvalidation/WWW/template_index_header.html | sed -e "s@insertPageName@Validation Plots --- Hit Efficiency Study --- Tracker Maps@g" > index_new.html
CreateIndex
mv index.html "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/Plots"
mv "SiStripHitEffTKMapBad.png" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/Plots"
mv "SiStripHitEffTKMap.png" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/Plots"
mv "Summary.png" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/Plots/Summary.png"
# Create the sqlite- and metadata-files
echo "Preparing the sqlite and metadata files"
ID1=`uuidgen -t`
cp dbfile.db SiStripHitEffBadModules@${ID1}.db
cat template_SiStripHitEffBadModules.txt | sed -e "s@insertFirstRun@$runnumber@g" -e "s@insertIOV@$runnumber@" > SiStripHitEffBadModules@${ID1}.txt
mv "SiStripHitEffBadModules@${ID1}.db" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/sqlite"
mv "SiStripHitEffBadModules@${ID1}.txt" "/afs/cern.ch/cms/tracker/sistrvalidation/WWW/CalibrationValidation/HitEfficiency/run_$runnumber/sqlite"
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