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|
'''CMS Conditions DB Python library.
'''
__author__ = 'Miguel Ojeda'
__copyright__ = 'Copyright 2013, CERN'
__credits__ = ['Giacomo Govi', 'Miguel Ojeda', 'Andreas Pfeiffer']
__license__ = 'Unknown'
__maintainer__ = 'Giacomo Govi'
__email__ = 'giacomo.govi@cern.ch'
import os
import hashlib
import logging
import sqlalchemy
import sqlalchemy.ext.declarative
import enum
from sqlalchemy import Enum
schema_name = 'cms_conditions'
dbuser_name = 'cms_conditions'
dbreader_user_name = 'cms_cond_general_r'
dbwriter_user_name = 'cms_cond_general_w'
logger = logging.getLogger(__name__)
#authentication/authorization params
authPathEnvVar = 'COND_AUTH_PATH'
dbkey_filename = 'db.key'
dbkey_folder = os.path.join('.cms_cond',dbkey_filename)
# frontier services
PRO ='PromptProd'
ARC ='FrontierArc'
INT ='FrontierInt'
DEV ='FrontierPrep'
# oracle read only services
ORAPRO = 'cms_orcon_adg'
ORAARC = 'cmsarc_lb'
# oracle masters
ORAINT = 'cms_orcoff_int'
ORADEV = 'cms_orcoff_prep'
ONLINEORAPRO = 'cms_orcon_prod'
ONLINEORAINT = 'cmsintr_lb'
# Set initial level to WARN. This so that log statements don't occur in
# the absense of explicit logging being enabled.
if logger.level == logging.NOTSET:
logger.setLevel(logging.WARN)
# Utility functions
def hash(data):
return hashlib.sha1(data.encode('ascii')).hexdigest()
# Constants
empty_label = '-'
name_length = 100
description_length = 4000
hash_length = len(hash(''))
web_experts_email = 'cms-cond-dev@cern.ch'
offline_db_experts_email = 'cms-offlinedb-exp@cern.ch'
offline_db_experts_phone = '+41 22 76 70817, or 70817 from CERN; check https://twiki.cern.ch/twiki/bin/viewauth/CMS/DBShifterHelpPage if it does not work; availability depends on the state of the LHC'
contact_help = 'If you need assistance, please write an email to %s and %s. If you need immediate/urgent assistance, you can call the Offline DB expert on call (%s).' % (offline_db_experts_email, web_experts_email, offline_db_experts_phone)
database_help = '''
The database parameter (--db) refers to the database where the tool
will connect to read all the data. By default, the production account
(through Frontier) will be used.
In subcommands which take a source and a destination, --db always refers to
the source, and --destdb to the destination. For both of them the following
rules apply.
The database parameter can be an official alias, a filename or any
valid SQLAlchemy URL.
The official aliases are the following strings (first column):
Alias Level Database RO/RW Notes
------------ ----------- ------------- ---------- -------------------------------
pro Production Frontier (ADG) read-only Default.
arc Archive Frontier read-only
int Integration Frontier read-only
dev Development Frontier read-only
boost Production Frontier read-only
boostprep Development Frontier read-only
orapro Production Oracle (ADG) read-only Password required.
oraarc Archive Oracle read-only Password required.
oraint Integration Oracle read-write Password required.
oradev Development Oracle read-write Password required.
onlineorapro Production Oracle read-write Password required. Online only.
onlineoraint Online Int Oracle read-write Password required. Online only.
Most of the time, if you are a regular user, you will want to read/copy
conditions from the Frontier production account. Therefore, you can omit
the --db parameter, unless you want to read from somewhere else,
e.g. from your local SQLite file.
In addition, the parameter may be a filename (path) pointing to a local
SQLite file, e.g.
file.db
relative/path/to/file.db
/absolute/path/to/file.db
Finally, any valid SQLAlchemy URL can be used. This allows full
flexibility in cases where it may be needed, e.g.
sqlite:// In-memory, volatile SQLite DB.
oracle://user@devdb11 Your private Oracle DB in devdb11 [*]
[*] See https://account.cern.ch/ -> Services for more information
on personal Oracle accounts.
For the official aliases, the password will be asked automatically
interactively. The same applies for Oracle URLs where the password
was not provided inside it, e.g.:
oracle://user@devdb11 The tool will prompt you for the password.
oracle://user:pass@devdb11 Password inlined. [+]
[+] Caution: Never write passwords in command-line parameters in
multi-user machines (e.g. lxplus), since other users can see them
in the process table (e.g. ps).
This means that both the official aliases and the filenames are shortcuts
to the full SQLAlchemy URL equivalents, e.g. the following are the same:
relative/path/to/file.db === sqlite:///relative/path/to/file.db
/absolute/path/to/file.db === sqlite:////absolute/path/to/file.db
'''
def oracle_connection_string(db_service, db_schema ):
return 'oracle://%s/%s'%(db_service,db_schema)
class Synchronization(enum.Enum):
any = 'any'
validation = 'validation'
mc = 'mc'
runmc = 'runmc'
hlt = 'hlt'
express = 'express'
prompt = 'prompt'
pcl = 'pcl'
offline = 'offline'
synch_list = list(x.value for x in list(Synchronization))
class TimeType(enum.Enum):
Run = 'Run'
Time = 'Time'
Lumi = 'Lumi'
Hash = 'Hash'
User = 'User'
# Schema definition
_Base = sqlalchemy.ext.declarative.declarative_base()
def fq_name( schema_name, table_name ):
name = table_name
if schema_name is not None:
name = '%s.%s' %(schema_name, table_name)
return name
db_models = {}
class _Col(Enum):
nullable = 0
notNull = 1
pk = 2
class DbRef:
def __init__(self,refType, refColumn):
self.rtype = refType
self.rcol = refColumn
def fq_col( schema, table, column ):
fqn = '%s.%s' %(table, column)
if schema is not None:
fqn = '%s.%s' %(schema,fqn)
return fqn
def make_dbtype( backendName, schemaName, baseType ):
members = {}
deps_reg = set()
dbtype_name = '%s_%s' %(baseType.__name__,backendName)
members['__tablename__'] = baseType.__tablename__
members['__table_args__'] = None
if schemaName is not None:
members['__table_args__'] = {'schema': schemaName }
for k,v in baseType.columns.items():
defColVal = None
if len(v)==3:
defColVal = v[2]
if isinstance(v[0],DbRef):
refColDbt = v[0].rtype.columns[v[0].rcol][0]
pk = (True if v[1]==_Col.pk else False)
if v[1]==_Col.pk:
members[k] = sqlalchemy.Column(refColDbt,sqlalchemy.ForeignKey(fq_col(schemaName,v[0].rtype.__tablename__,v[0].rcol)),primary_key=True)
else:
nullable = (False if v[1] == _Col.notNull else True)
members[k] = sqlalchemy.Column(refColDbt,sqlalchemy.ForeignKey(fq_col(schemaName,v[0].rtype.__tablename__,v[0].rcol)),nullable=nullable)
if v[0].rtype.__name__ not in deps_reg:
deps_reg.add(v[0].rtype.__name__)
reftype_name = '%s_%s' %(v[0].rtype.__name__,backendName)
members[(v[0].rtype.__name__).lower()] = sqlalchemy.orm.relationship(reftype_name)
else:
if v[1]==_Col.pk:
members[k] = sqlalchemy.Column(v[0],primary_key=True)
else:
nullable = (True if v[1]==_Col.nullable else False)
if defColVal is None:
members[k] = sqlalchemy.Column(v[0],nullable=nullable)
else:
members[k] = sqlalchemy.Column(v[0],nullable=nullable, default=defColVal)
dbType = type(dbtype_name,(_Base,),members)
if backendName not in db_models.keys():
db_models[backendName] = {}
db_models[backendName][baseType.__name__] = dbType
return dbType
def getSchema(tp):
if tp.__table_args__ is not None:
return tp.__table_args__['schema']
return None
class Tag:
__tablename__ = 'TAG'
columns = { 'name': (sqlalchemy.String(name_length),_Col.pk),
'time_type': (sqlalchemy.Enum(*tuple(TimeType.__members__.keys())),_Col.notNull),
'object_type': (sqlalchemy.String(name_length),_Col.notNull),
'synchronization': (sqlalchemy.Enum(*tuple(Synchronization.__members__.keys())),_Col.notNull),
'description': (sqlalchemy.String(description_length),_Col.notNull),
'last_validated_time':(sqlalchemy.BIGINT,_Col.notNull),
'end_of_validity':(sqlalchemy.BIGINT,_Col.notNull),
'insertion_time':(sqlalchemy.TIMESTAMP,_Col.notNull),
'modification_time':(sqlalchemy.TIMESTAMP,_Col.notNull),
'protection_code':(sqlalchemy.Integer,_Col.notNull,0) }
class TagMetadata:
__tablename__ = 'TAG_METADATA'
columns = { 'tag_name': (DbRef(Tag,'name'),_Col.pk),
'min_serialization_v': (sqlalchemy.String(20),_Col.notNull),
'min_since': (sqlalchemy.BIGINT,_Col.notNull),
'modification_time':(sqlalchemy.TIMESTAMP,_Col.notNull) }
class TagAuthorization:
__tablename__ = 'TAG_AUTHORIZATION'
columns = { 'tag_name': (DbRef(Tag,'name'),_Col.pk),
'access_type': (sqlalchemy.Integer,_Col.notNull),
'credential': (sqlalchemy.String(name_length),_Col.notNull),
'credential_type':(sqlalchemy.Integer,_Col.notNull) }
class Payload:
__tablename__ = 'PAYLOAD'
columns = { 'hash': (sqlalchemy.CHAR(hash_length),_Col.pk),
'object_type': (sqlalchemy.String(name_length),_Col.notNull),
'data': (sqlalchemy.BLOB,_Col.notNull),
'streamer_info':(sqlalchemy.BLOB,_Col.notNull),
'version':(sqlalchemy.String(20),_Col.notNull),
'insertion_time':(sqlalchemy.TIMESTAMP,_Col.notNull) }
class IOV:
__tablename__ = 'IOV'
columns = { 'tag_name':(DbRef(Tag,'name'),_Col.pk),
'since':(sqlalchemy.BIGINT,_Col.pk),
'insertion_time':(sqlalchemy.TIMESTAMP,_Col.pk),
'payload_hash':(DbRef(Payload,'hash'),_Col.notNull) }
class GlobalTag:
__tablename__ = 'GLOBAL_TAG'
columns = { 'name':(sqlalchemy.String(name_length),_Col.pk),
'validity': (sqlalchemy.BIGINT,_Col.notNull),
'description':(sqlalchemy.String(description_length),_Col.notNull),
'release':(sqlalchemy.String(name_length),_Col.notNull),
'insertion_time':(sqlalchemy.TIMESTAMP,_Col.notNull),
'snapshot_time':(sqlalchemy.TIMESTAMP,_Col.notNull) }
class GlobalTagMap:
__tablename__ = 'GLOBAL_TAG_MAP'
columns = { 'global_tag_name':(DbRef(GlobalTag,'name'),_Col.pk),
'record':(sqlalchemy.String(name_length),_Col.pk),
'label':(sqlalchemy.String(name_length),_Col.pk),
'tag_name':(DbRef(Tag,'name'),_Col.notNull) }
class TagLog:
__tablename__ = 'TAG_LOG'
columns = { 'tag_name':(DbRef(Tag,'name'),_Col.pk),
'event_time':(sqlalchemy.TIMESTAMP,_Col.pk),
'action':(sqlalchemy.String(100),_Col.pk),
'user_name':(sqlalchemy.String(100),_Col.notNull),
'host_name':(sqlalchemy.String(100),_Col.notNull),
'command':(sqlalchemy.String(500),_Col.notNull),
'user_text':(sqlalchemy.String(4000),_Col.notNull) }
class RunInfo:
__tablename__ = 'RUN_INFO'
columns = { 'run_number':(sqlalchemy.BIGINT,_Col.pk),
'start_time':(sqlalchemy.TIMESTAMP,_Col.notNull),
'end_time':(sqlalchemy.TIMESTAMP,_Col.notNull) }
class BoostRunMap:
__tablename__ = 'BOOST_RUN_MAP'
columns = { 'run_number':(sqlalchemy.BIGINT,_Col.pk),
'run_start_time':(sqlalchemy.TIMESTAMP,_Col.notNull),
'boost_version': (sqlalchemy.String(20),_Col.notNull) }
# CondDB object
class Connection(object):
def __init__(self, url):
# Workaround to avoid creating files if not present.
# Python's sqlite3 module does not use sqlite3_open_v2(),
# and therefore we cannot disable SQLITE_OPEN_CREATE.
# Only in the case of creating a new database we skip the check.
if url.drivername == 'sqlite':
self.engine = sqlalchemy.create_engine(url)
enabled_foreign_keys = self.engine.execute('pragma foreign_keys').scalar()
supports_foreign_keys = enabled_foreign_keys is not None
if not supports_foreign_keys:
logger.warning('Your SQLite database does not support foreign keys, so constraints will not be checked. Please upgrade.')
elif not enabled_foreign_keys:
self.engine.execute('pragma foreign_keys = on')
else:
self.engine = sqlalchemy.create_engine(url, max_identifier_length=30)
self._session = sqlalchemy.orm.scoped_session(sqlalchemy.orm.sessionmaker(bind=self.engine))
self._is_frontier = url.drivername == 'oracle+frontier'
self._is_oracle = url.drivername == 'oracle'
self._is_sqlite = url.drivername == 'sqlite'
self._is_read_only = self._is_frontier or url.host in {
'cms_orcon_adg',
'cmsarc_lb',
}
self._is_official = self._is_frontier or url.host in {
'cms_orcon_adg',
'cmsarc_lb',
'cms_orcoff_int',
'cms_orcoff_prep',
'cms_orcon_prod',
'cmsintr_lb',
}
self._url = url
self._backendName = ('sqlite' if self._is_sqlite else 'oracle' )
self._schemaName = ( None if self._is_sqlite else schema_name )
logging.debug('Loading db types...')
self.get_dbtype(Tag).__name__
self.get_dbtype(Payload)
self.get_dbtype(IOV)
self.get_dbtype(TagLog)
self.get_dbtype(GlobalTag)
self.get_dbtype(GlobalTagMap)
self.get_dbtype(RunInfo)
if not self._is_sqlite:
self.get_dbtype(TagMetadata)
self.get_dbtype(TagAuthorization)
self.get_dbtype(BoostRunMap)
self._is_valid = self.is_valid()
def get_dbtype(self,theType):
basename = theType.__name__
if self._backendName not in db_models.keys() or basename not in db_models[self._backendName].keys():
return make_dbtype( self._backendName, self._schemaName, theType )
else:
return db_models[self._backendName][basename]
def session(self):
s = self._session()
s.get_dbtype = self.get_dbtype
s._is_sqlite = self._is_sqlite
s.is_oracle = self.is_oracle
s._url = self._url
return s
@property
def metadata(self):
return _Base.metadata
@property
def is_frontier(self):
return self._is_frontier
@property
def is_oracle(self):
return self._is_oracle
@property
def is_sqlite(self):
return self._is_sqlite
@property
def is_read_only(self):
return self._is_read_only
@property
def is_official(self):
return self._is_official
def is_valid(self):
'''Tests whether the current DB looks like a valid CMS Conditions one.
'''
engine_connection = self.engine.connect()
# temporarely avoid the check on the GT tables - there are releases in use where C++ does not create these tables.
_Tag = self.get_dbtype(Tag)
_IOV = self.get_dbtype(IOV)
_Payload = self.get_dbtype(Payload)
ret = all([self.engine.dialect.has_table(engine_connection, table.__tablename__,getSchema(table)) for table in [_Tag, _IOV, _Payload]])
engine_connection.close()
return ret
def init(self, drop=False):
'''Initializes a database.
'''
logging.info('Initializing database...')
if drop:
logging.debug('Dropping tables...')
self.metadata.drop_all(self.engine)
self._is_valid = False
else:
if not self._is_valid:
logging.debug('Creating tables...')
self.get_dbtype(Tag).__table__.create(bind = self.engine)
self.get_dbtype(Payload).__table__.create(bind = self.engine)
self.get_dbtype(IOV).__table__.create(bind = self.engine)
self.get_dbtype(TagLog).__table__.create(bind = self.engine)
self.get_dbtype(GlobalTag).__table__.create(bind = self.engine)
self.get_dbtype(GlobalTagMap).__table__.create(bind = self.engine)
self._is_valid = True
def getSessionOnMasterDB( session1, session2 ):
key = '%s/%s'
sessiondict = { }
sessiondict[key %(session1._url.drivername,session1._url.host)] = session1
sessiondict[key %(session2._url.drivername,session2._url.host)] = session2
masterkey = key %('oracle',ONLINEORAPRO)
if masterkey in sessiondict.keys():
return sessiondict[masterkey]
adgkey = key %('oracle',ORAPRO)
if adgkey in sessiondict.keys():
return sessiondict[adgkey]
frontierkey = key %('frontier',PRO)
if frontierkey in sessiondict.keys():
return sessiondict[frontierkey]
# default case: frontier on pro
conn = Connection(make_url())
session = conn.session()
# is it required?
session._conn = conn
return session
# Connection helpers
def _getCMSFrontierConnectionString(database):
import subprocess
return subprocess.Popen(['cmsGetFnConnect', 'frontier://%s' % database], stdout = subprocess.PIPE).communicate()[0].strip()
def _getCMSSQLAlchemyConnectionString(technology,service,schema_name):
if technology == 'frontier':
import urllib
import sys
py3k = sys.version_info >= (3, 0)
if py3k:
return '%s://@%s/%s' % ('oracle+frontier', urllib.parse.quote_plus(_getCMSFrontierConnectionString(service)), schema_name )
else:
return '%s://@%s/%s' % ('oracle+frontier', urllib.quote_plus(_getCMSFrontierConnectionString(service)), schema_name )
elif technology == 'oracle':
return '%s://%s@%s' % (technology, schema_name, service)
# Entry point
def make_url(database='pro',read_only = True):
if database.startswith('sqlite:') or database.startswith('sqlite_file:'):
ignore, database = database.split(':',1)
if ':' in database and '://' not in database: # check if we really got a shortcut like "pro:<schema>" (and not a url like proto://...), if so, disentangle
database, schema = database.split(':')
officialdbs = {
# frontier
'pro' : ('frontier','PromptProd', { 'R': schema_name }, ),
'arc' : ('frontier','FrontierArc', { 'R': schema_name }, ),
'int' : ('frontier','FrontierInt', { 'R': schema_name }, ),
'dev' : ('frontier','FrontierPrep', { 'R': schema_name }, ),
# oracle adg
'orapro': ('oracle', 'cms_orcon_adg', { 'R': dbreader_user_name }, ),
'oraarc': ('oracle', 'cmsarc_lb', { 'R': dbreader_user_name }, ),
# oracle masters
'oraint': ('oracle', 'cms_orcoff_int', { 'R': dbreader_user_name,
'W': dbwriter_user_name }, ),
'oradev': ('oracle', 'cms_orcoff_prep', { 'R': dbreader_user_name,
'W': dbwriter_user_name }, ),
'onlineorapro': ('oracle', 'cms_orcon_prod', { 'R': dbreader_user_name,
'W': dbwriter_user_name }, ),
'onlineoraint': ('oracle', 'cmsintr_lb', { 'R': dbreader_user_name,
'W': dbwriter_user_name }, ),
}
if database in officialdbs.keys():
key = ('R' if read_only else 'W')
mapping = officialdbs[database]
tech = mapping[0]
service = mapping[1]
schema_dict = mapping[2]
if key in schema_dict.keys():
database = _getCMSSQLAlchemyConnectionString(tech,service,schema_dict[key])
else:
raise Exception("Read-only database %s://%s cannot be accessed in update mode." %(tech,service))
logging.debug('connection string set to "%s"' % database)
try:
url = sqlalchemy.engine.url.make_url(database)
except sqlalchemy.exc.ArgumentError:
url = sqlalchemy.engine.url.make_url('sqlite:///%s' % database)
return url
def connect(url, authPath=None, verbose=0, as_admin=False):
'''Returns a Connection instance to the CMS Condition DB.
See database_help for the description of the database parameter.
The verbosity level is as follows:
0 = No output (default).
1 = SQL statements issued, including their parameters.
2 = In addition, results of the queries (all rows and the column headers).
'''
check_admin = as_admin
if url.drivername == 'oracle':
if url.username is None:
logging.error('Could not resolve the username for the connection %s. Please provide a connection in the format oracle://[user]:[pass]@[host]' %url )
raise Exception('Connection format error: %s' %url )
if url.password is None:
if authPath is None:
if authPathEnvVar in os.environ:
authPath = os.environ[authPathEnvVar]
explicit_auth = False
if authPath is not None:
dbkey_path = os.path.join(authPath,dbkey_folder)
if not os.path.exists(dbkey_path):
authFile = os.path.join(authPath,'.netrc')
if os.path.exists(authFile):
entryKey = url.host.lower()+"/"+url.username.lower()
logging.debug('Looking up credentials for %s in file %s ' %(entryKey,authFile) )
import netrc
params = netrc.netrc( authFile ).authenticators(entryKey)
if params is not None:
(username, account, password) = params
url.username = username
url.password = password
else:
msg = 'The entry %s has not been found in the .netrc file.' %entryKey
raise TypeError(msg)
else:
explicit_auth =True
else:
import libCondDBPyBind11Interface as auth
role_code = auth.reader_role
if url.username == dbwriter_user_name:
role_code = auth.writer_role
if check_admin:
role_code = auth.admin_role
connection_string = oracle_connection_string(url.host.lower(),schema_name)
logging.debug('Using db key to get credentials for %s' %connection_string )
(dbuser,username,password) = auth.get_credentials_from_db(connection_string,role_code,authPath)
if username=='' or password=='':
raise Exception('No credentials found to connect on %s with the required access role.'%connection_string)
check_admin = False
url.username = username
url.password = password
else:
import getpass
pwd = getpass.getpass('Password for %s: ' % str(url))
if pwd is None or pwd == '':
pwd = getpass.getpass('Password for %s: ' % str(url))
if pwd is None or pwd == '':
raise Exception('Empty password provided, bailing out...')
url.password = pwd
if check_admin:
raise Exception('Admin access has not been granted. Please provide a valid admin db-key.')
if check_admin:
raise Exception('Admin access is not available for technology "%s".' %url.drivername)
if verbose >= 1:
logging.getLogger('sqlalchemy.engine').setLevel(logging.INFO)
if verbose >= 2:
logging.getLogger('sqlalchemy.engine').setLevel(logging.DEBUG)
return Connection(url)
def _exists(session, primary_key, value):
ret = None
try:
ret = session.query(primary_key).\
filter(primary_key == value).\
count() != 0
except sqlalchemy.exc.OperationalError:
pass
return ret
def _inserted_before(timestamp):
'''To be used inside filter().
'''
if timestamp is None:
# XXX: Returning None does not get optimized (skipped) by SQLAlchemy,
# and returning True does not work in Oracle (generates "and 1"
# which breaks Oracle but not SQLite). For the moment just use
# this dummy condition.
return sqlalchemy.literal(True) == sqlalchemy.literal(True)
return conddb.IOV.insertion_time <= _parse_timestamp(timestamp)
def listObject(session, name, snapshot=None):
is_tag = _exists(session, Tag.name, name)
result = {}
if is_tag:
result['type'] = 'Tag'
result['name'] = session.query(Tag).get(name).name
result['timeType'] = session.query(Tag.time_type).\
filter(Tag.name == name).\
scalar()
result['iovs'] = session.query(IOV.since, IOV.insertion_time, IOV.payload_hash, Payload.object_type).\
join(IOV.payload).\
filter(
IOV.tag_name == name,
_inserted_before(snapshot),
).\
order_by(IOV.since.desc(), IOV.insertion_time.desc()).\
from_self().\
order_by(IOV.since, IOV.insertion_time).\
all()
try:
is_global_tag = _exists(session, GlobalTag.name, name)
if is_global_tag:
result['type'] = 'GlobalTag'
result['name'] = session.query(GlobalTag).get(name)
result['tags'] = session.query(GlobalTagMap.record, GlobalTagMap.label, GlobalTagMap.tag_name).\
filter(GlobalTagMap.global_tag_name == name).\
order_by(GlobalTagMap.record, GlobalTagMap.label).\
all()
except sqlalchemy.exc.OperationalError:
sys.stderr.write("No table for GlobalTags found in DB.\n\n")
if not is_tag and not is_global_tag:
raise Exception('There is no tag or global tag named %s in the database.' % name)
return result
def getPayload(session, hash):
# get payload from DB:
data, payloadType = session.query(Payload.data, Payload.object_type).filter(Payload.hash == hash).one()
return data
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